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Dr. Mark Hyman
What if brain fog, anxiety and mood swings aren't simply all in your head? What if the health of your mind actually starts deeper in your body, in your gut, in your hormones, metabolism and your immune system? Well, let me tell you, the connection is real and it affects how you think and you feel every single day. And that's why I created Brain Shaping Academy, a six week program that shows you how healing your body can help you heal your mind. Brain Shaping Academy relies on the same targeted nutrition and lifestyle strategies that I've used for 30 years to help my patients improve their mental, emotional and cognitive health. So if you want to feel calmer, clearer and more in control and stay sharp and protect your brain as you age, check out Brain shaping academy@Dr.hyman.com brainshaping that's Dr. Hyman.com brainshaping. Welcome to Office Hours. This is our dedicated one on one space to go deeper, get clearer and explore what truly moves the needle for your health. I'm Dr. Mark Hyman and each week we're going to pull back the curtain and share the insights, the research, the lessons that don't always make it into our conversations with guests. Because at the end of the day, you are the CEO of your own health and for many of you, your family's health too. And you might not feel it all the time, but you have far more power and agency than you realize. I'm glad you're here. This episode is brought to you by Function Health, empowering you to live 100 healthy years with over 160 lab tests for just $365 a year. And use the code MARK2026 to get $50 off your membership. If you've ever had a migraine, you know this isn't just a headache. It's the pounding pain, the nausea, the sensitivity to light and sound. Sometimes it's so severe you can't function at all. And for many people, the message they get is simple. Take medication, avoid your triggers, learn to live with it. But here's the problem. That approach may help manage symptoms, but it doesn't explain why this is happening in the first place. Because migraines aren't random. They're not just genetic, and they're not just about your head. Migraines are a whole body issue. They involve inflammation, hormones, blood sugar control, gut health, your nervous system, and lots more. So today I want to walk you through a functional medicine approach to migraines. Not just how to treat them, but how to understand and prevent them at the root. So what is A migraine? Well, let's start with the basics. A migraine is not just a headache, it's a neurological event. It can include throbbing or one sided pain, nausea or vomiting, sensitivity to light and sound, visual disturbances like an aura, and often brain fog or fatigue. So what's actually happening? Well, the brain becomes more sensitive and more reactive. There's inflammation, there's dysregulation in blood vessels and nerve signaling. And the nervous system is more activated than it really should be. And here's the point. Migraines are a signal. They're not the problem. What are the root causes of migraines? Well, this is where we shift the conversation. Instead of asking how do we stop the migraine? We ask what's driving it. So let's walk through the most common root causes. Inflammation. Chronic low grade inflammation is one of the biggest drivers of migraines. This can come from ultra processed foods. It can come from food sensitivities like gluten or dairy, poor gut health and environmental toxins. Inflammation makes the brain more sensitive, it lowers your threshold for a migraine. Blood sugar imbalance, well, that's one of the most overlooked triggers. If your blood sugar is constantly spiking and crashing, your brain feels it skipping meals, eating a lot of refined carbs or sugar, or going long periods without food, all of these can trigger migraines. Your brain needs steady fuel. And when that fuel becomes unstable, it creates stress in the system. The next thing that can often be a factor is hormone fluctuations, especially for women. Now many women notice that their migraines follow a pattern. And that's not a coincidence. Migraines most commonly happen right before their period starts, starts in the few days leading up to menstruation. So why did that happen? Because that's when estrogen levels drop sharply. Estrogen plays a big role in the brain. It helps regulate neurotransmitters like serotonin. It has anti inflammatory effects. So when estrogen suddenly falls, it can increase inflammation, it can disrupt brain signaling and can make the nervous system just more sensitive. That combination can trigger migraine. Some women also experience migraines around ovulation, when hormones shift again, or during menopause when estrogen levels become more unpredictable and so does progesterone. So it's not just about having too much or too little estrogen, it's about fluctuations and instability. And hormones influence inflammation, influence brain chemistry. They influence how reactive your system is. And that's why many women who experience migraines on a cyclical basis. And why actually tracking your Cycle can be one of the most powerful tools for understanding your triggers. And then you can actually do something about it. The next big factor is gut health. Now, there's a powerful connection between your gut and your brain. It plays a major role in migraines. In fact, we all often call this the gut brain axis. Your gut is constantly communicating with your brain through the nervous system, the immune system, and even chemical messengers like neurotransmitters. So when something is off in the gut, your brain feels it. Common issues we see include dysbiosis, which is an imbalance of gut bacteria, leaky gut, where the intestinal lining becomes more permeable, and food sensitivities, which can trigger immune reactions and brain inflammation. All these can increase inflammation throughout the whole body. And inflammation is one of the biggest drivers of migraines. But it doesn't stop there. About 90% of your serotonin, a key neurotransmitter involved in mood and pain regulation, is actually produced in the gut. So when your gut's out of balance, it can disrupt your brain chemistry, it can lower your threshold for stress, and it can make your nervous system just more reactive. And that's why so many people with migraines also experiencing bloating, irritable bowel syndrome, or other digestive symptoms. Now, your gut is not just about digestion. It's a central hub for your immune system, your hormones, your brain. And when you start to heal the gut, you often see improvements, not just in digestion, but in migraines as well. And I've had many patients I treated with serious gut issues that fix their migraines. So it really works. The next big factor in migraines could be nutritional deficiencies. And there's a few critical ones for brain health. One is magnesium. And I had a patient who was a radiation oncologist from Mayo, a resident who had intractable migraines. And she was on narcotics and anti nausea pills that were like, I think, get chemo patients. It was bad and turned out she just had a magnesium deficiency. And we treat her magnesium deficiency and her migraines went away. It's not always that simple. But for her it was also B vitamins are really important, especially riboflavin or B2. And also coenzyme Q10 is important in mitochondrial function, and that can be a factor also in migraines. There's not just one kind of migraine. And migraines are not because of the side they're on or where they are, but because of the cause. So it could be Hormones, it could be gut, it could be nutrients. So you've got to figure out what the issues. It could be mitochondria. And they, these nutrients basically support energy production in the brain and they help regulate nerve function. So when you're low, your whole system becomes more vulnerable. Another big factor is nervous system dysregulation. This is a big one. You know, stress doesn't just trigger migraines. It lowers your resilience. Your body's constantly in fight or flight mode. You're more sensitive to everything. You're sensitive to poor sleep, to chronic stress, to overstimulation. All of this keeps your nervous system activated. And that makes it much easier for migraine to happen. So why does conventional medicine not work so well? Where does it fall short? Short? Well, medications can be helpful for sure, and they can be life saving. And for some people they're necessary, but they don't address the root causes, they don't fix the inflammation, they don't stabilize blood sugar, they don't heal the gut, they don't regulate the nervous system. In some cases, they can even lead to rebound headaches, meaning you take the drug and you get another headache. So if you don't change the underlying terrain, the pattern continues. So what can you actually do? What helps? Let's walk through the functional medicine approach. The first is stabilize your blood sugar. One of the most overlooked drivers of migraines is just unstable blood sugar, which affects so many Americans. When your sugar spikes and then crashes throughout the day, it just creates a stress in the body. And for some people, that's enough to trigger a migraine. So it's one of the simplest and the most effective places to start. So how do you do that? We'll focus on protein with every meal. Good fats, the protein helps slow digestion, helps your energy more stable. Try not to skip meals, you know, especially early in the day. Long gaps without food can set you up for these drops in blood sugar. And be mindful of refined carbs and sugar like pastries, white bread, sugary snacks. Cause they cause quick spites and then you get crashes in your blood sugar. And for many people, stabilizing blood sugar alone can really dramatically reduce the frequency of migraines. So if that doesn't work, what else can you do? Well, you want to identify food triggers. Another key piece is identifying your personal food triggers, because migraines are highly personal. What triggers? One person may not affect someone else in the same way. So there are some common patterns. We see foods like gluten, that's A big one. And that would be an easy one to get rid of to see if your migraines go away. Dairy, another big one. Wine, especially alcohol in general, but wine especially because of sulfites, highly processed foods, there's a lot of additives, chemicals, things that can be all serious triggers. The challenge is these reactions aren't always immediate. Sometimes there's a delayed response, which kind of makes it harder to connect the dots. So you might eat something on Monday, but you get your migraine on Wednesday. Right. And that's where an elimination diet can really be helpful. If you get rid of all the common triggers for a period of time, and then you reintroduce them intentionally, you can actually start to see how your body responds. And that awareness is really powerful. And in fact, we have something called the 10 Day Detox Diet. You can go to 10day detoxdiet.com and it guides you through a whole elimination diet. It can be very powerful. And often that is enough to get rid of your migraines, just that alone. Next thing would be to reduce inflammation at a deeper level. Migraines are really about inflammation in the body. So the goal is to create an internal environment that's calmer, more stable. And that starts with your overall diet. Right? Whole real foods, lots of good fats, omega 3s, fatty fish, walnuts, flaxseeds, all help counter inflammation. So you want to eat a wide variety of colorful plants, vegetables, vegetables, fruits, herbs, nuts, seeds. All these provide antioxidants to support your system. At the same time, you want to get rid of the ultra processed food. There's no world in which we should be eating any of that. I think the safe limit is zero, in my view. I mean, if you have a Snickers bar once in a while, it's not going to kill you. But I'm just telling you that this is not part of a human diet. These are not actually technically food by the definition, the dictionary, which is something that supports the health of an organism, which these don't. So because they tend to drive inflammation, they really disrupt your body's overall balance. So when you lower the overall inflammation in the body, you often lower the threshold for migraines as well. Okay, the next big thing you want to do is support the gut. Your gut plays a much bigger role in migraines than most people realize. There's a huge connection between gut health and brain health. And I, I remember one patient where I literally treated her migraines with antibiotics to clear out the bad bugs in her gut and her migraines went away. So it can be something that obvious or simple, which traditional doctors generally don't do. So supporting your gut can have a really powerful impact on how often migraines occur. So how do you do that? Well, lots of fiber, vegetables, fruits, nuts, seeds help feed the beneficial bacteria. Prebiotic foods, fermented foods, things like sauerkraut, kimchi, yogurt, all help a healthy microbiome. Now, but for some people, there may be more serious issues at play. Dysbiosis, food sensitivities, inflammation from other factors, infections, those need to be addressed. Yeast overgrowth, fungal overgrowth, bacterial overgrowth, all need to be addressed. Parasites, they, they can be factors and they can be treated with a good functional medicine.
Podcast Host/Interviewer
Doctor.
Dr. Mark Hyman
Now, the big idea, by the way, we're at Ultra Wellness Center. We have a great practice and lots of great doctors. You can come see us in Lenox, Massachusetts. Now, the big idea is this. When your gut improves, your brain often follows. And for many people, this is a key part of reducing migraines. All right, what can we do besides all that? Well, put back the nutrients that are missing. And testing is really important here because you don't want to guess, you want to test. You want to know what your body actually needs. So getting comprehensive labs like we do at Function Health can help you understand your nutrient levels and identify what you're deficient in. And we see about 70% of people with deficiencies in nutrients, including B12, including magnesium, including omega 3s and CoQ10, all the things that are really quite important. And you can look at magnesium, you can look at riboflavin, you can look at CoQ10, you can look at some of these key nutrients that are critical for brain energy and proper nerve function. And when your levels are low, well, your system becomes way more vulnerable to migraines. Here's a statistic that should bother you. Women are more likely to be told their labs are normal, more likely to experience delays in diagnosis for certain conditions, and more likely to leave the doctor's office without real answers. Too often, the women navigating all this are being evaluated with one or two basic markers and then sent home with nothing. And this is especially true in midlife, when the stakes are highest and hormone shifts and insulin sensitivity changes and cardiovascular risk rises. Let this Mother's Day be different. Not a gift that disappears by next weekend, but a gift that actually changes their life. The gift of data Function gives you access to over 160 lab tests annually, including deeper hormone, metabolic and heart health markers, and more the strongest woman you know deserves real information. It's time to stop guessing. Check your health with function. Function gives you access to over 160 lab tests every year, including advanced lipoprotein testing. It's time to stop guessing. Check your health with function. Go to functionhealth.com, and if you're one of the first 1,000 people this week, use the code Mark Mark 2026 for a 50 credit toward your $365 a year membership. That's functionhealth.com, and use the code Mark2026 today. All right, the next thing we want to do is regulate your nervous system. This is a little hard in our modern world, but, you know, it's one of the most important and pretty overlooked areas in this. How do you regulate your nervous system? Because migraines aren't just physical. They're deeply connected to how your body processes stress. So if your nervous system is always in a heightened state, it's overstimulated, overloaded, always quote on it lowers your threshold for triggers, meaning things that wouldn't normally cause a migraine. Well, they suddenly do. So learning how to regulate your nervous system is essential. And the good news is it doesn't have to be complicated. Simple, consistent habits can make a real difference. Things like breath work, even just a few minutes of slow, controlled breathing can help shift your body out of that stress response. Consistent sleep's also really important because your nervous system resets when you sleep, and irregular sleep can make everything more reactive. Also, exercise. Regular movement, not crazy, intense exercise, but steady daily movement, helps your body get rid of stress and just overall stress reduction, creating small moments in your day where your system can actually relax. Because the goal here isn't to eliminate stress completely. Not realistic, obviously. It's to build resilience. You're not just reducing stress, you're increasing your capacity to handle it. So when your nervous system becomes more regulated, your body's less reactive. And that can play a powerful role in reducing your migraines over time. All right, so I want you to get into a prevention mindset. Here's the shift I want you to make. Migraines don't come out of nowhere. They happen when your system reaches a threshold and you're like a bucket. Stress fills the bucket. Poor sleep fills the bucket. Food triggers fill the bucket. Hormone changes fill the bucket. Nutrient deficiencies fill the bucket. And when it overflows, well, that's when a migraine happens. So the goal is simple. Lower the load, increase your resilience, and if you only take one thing away from this whole conversation, let it be this. Migraines are not random. They are your body's way of telling you something is out of balance. And while medications can help, they're not the whole answer. When you become the CEO of your own health and you focus on reducing inflammation, balancing your blood sugar, supporting your gut and regulating your nervous system, you change the environment the migraines depend on. It's not about perfection, it's about understanding your body and making small consistent changes. Because you don't have to just manage migraines, you can reduce them. At the root, no two migraine patients are the same. And this is really where functional medicine shines. To bring this to life, here's a
Podcast Host/Interviewer
clip from a previous episode with my
Dr. Mark Hyman
colleague Todd Lapine from the Ultra Wellness Center. In this clip, he walks through a unique case study and gives you a firsthand look at how we dig deeper to uncover the root cause. If you want to go even further on migraines, you can find the full episode linked in the show notes. So really like, tell us about some
Podcast Host/Interviewer
of your cases that you've had experience
Dr. Mark Hyman
with that have really kind of change your thinking and have helped you understand.
Todd Lapine
Well, I had, I had a patient who came in and his story was that he first developed migraines starting around at the age of five, which is interesting. Okay, so, so when you have a history of somebody who's having headaches, I mean, it's not normal for a five year old to have headaches. That makes me sort of think, okay, this person may have a mitochondrial issue and that may be what's going on early on in their story. Also, interestingly, the patient noticed when he was telling me his story that he would get the worst headaches on the weekends. And on further asking him, it turned out that on the weekends he didn't drink coffee. So what he was getting it was a caffeine withdrawal headache. Right. Now this is probably one of those things that, because caffeine is a double edged sword, we actually use caffeine to treat migraines. And if patients take like over the counter medications like Excedrin migraine, guess what? One of the major ingredients in there is caffeine. In fact, I had a patient, I'll never forget this, it was a woman who had refractory migraines and it turned out that she actually was getting rebound headaches from daily use of Excedrin migraine. And so she would have to take the Excedrin migraine to prevent the withdrawal effect. From the caffeine. So it was like a cat chasing a stair.
Dr. Mark Hyman
So that's not great because that's got tall.
Todd Lapine
Well, it's great for the company because they keep selling it. Right, Liver problems, right? Yeah, exactly, yeah. So this patient was caffeine sensitive. So some of the treatments, you can actually abort a migraine with caffeine, but you can also trigger migraine. So it's this sort of a double edged sword in terms of the effect of caffeine. But typically if I have somebody who's got migraines, I get them off of all alcohol, all caffeine, and give them some magnesium. Just that you can shoot from the hip and just do that and you can make a big, a huge impact. So that was an interesting with the patient. And this particular patient also had a history of developing an egg allergy at age 21, which was interesting. Like why, you know, what's going on? Why did they all of a sudden develop an egg allergy? In addition to that, the patients said that they would develop the itching with eggs and then also had itching with bananas.
Dr. Mark Hyman
Oh, wow.
Todd Lapine
Right. Which then sort of makes me think about, is there a problem with histamine and histamine detoxification? There are specific genes in the body that have to do with histamine synthesis and also histamine deto. And you can do some esoteric testing on that to see because histamine I definitely think plays a big role in migraines.
Dr. Mark Hyman
So what does histamine, Todd?
Todd Lapine
Well, histamine is the drug or not the drug. It's the compound that is naturally found in the body and it is actually a neurotransmitter. It's also involved in allergies. So when we have spring allergies or allergic rhinitis, we treat that with an antihistamine.
Podcast Host/Interviewer
Right.
Todd Lapine
All right, now this is sort of interesting and I'll about this one.
Dr. Mark Hyman
And it's made by your white blood cells.
Todd Lapine
It's. Right, it's. Well, yeah, it's made by. It's also made by gut bacteria. It's found in food. It's made by the white blood cells, specifically the mast cells. Exactly. And there are certain receptors for histamine. So there's I think there's like four receptors for histamine. And interestingly, when you block histamine, what happens to you? You fall asleep. You ever take Benadryl? Right. That Benadryl puts you to sleep. So histamine actually activates the body. It wakes the body up. So it Actually works as a neurotransmitter. Also. It's involved in allergies and itching and things like that. So histamine is one of these things.
Dr. Mark Hyman
You can get hives or things like that.
Todd Lapine
You can get hives, exactly.
Podcast Host/Interviewer
Yeah.
Todd Lapine
So histamine definitely plays. It's one of the things that can play a role in migraine headaches.
Dr. Mark Hyman
So how do you approach a patient who's got histamine sensitivity? Well, how do you diagnose it first?
Todd Lapine
Yeah. Well, how do you treat it? Well, one of the things that you can do is put somebody on a low histamine diet, because a lot of the foods that we. That we take in are. Can have. Can be high in histamine. Normally, our body will just sort of deal with excess amounts of histamine, but when the gut bacteria is out, like if you have sibo, you'll have problems with histamine breakdown or histamine degradation, or certain bacteria will actually be making high levels of histamine, which in turn can affect the brain and your. Your neurological system.
Dr. Mark Hyman
Incredible. Yeah, yeah. I. I've seen, you know, histamine treatment when you do it in the right patient by both dietary changes. Also, there's all kinds of supplements that can help, like quercetin, even medication like cromolyn, and people can take orally, you know, histis, which is various supplements that help with modifying the histamine response and getting the diet low in histamine. People can really have radical transformations in
Podcast Host/Interviewer
their health, and that's something most doctors think about or do.
Dr. Mark Hyman
Yeah. And it's tricky to do, but it can be really effective. Yeah, yeah.
Todd Lapine
And this, in this particular patient, when I did the testing on him, lo and behold, he had significant sensitivity to gluten, which he was totally unaware of, and had never really worked with a nutritionist. Sometimes, you know, they say, well, I worked with a dietitian, and, you know, they're a regular dietitian is they're not really all that helpful. You're having a nutritionist who's trained in functional medicine can really look at the diet beyond just, you know, calories and the macronutrient proteins, fat and carbohydrates is very, very important. So in this particular patient, the organic acid testing showed a higher need for the B vitamins, showed some evidence of dysbiosis, which is imbalances of the gut. Bacteria had significant gluten sensitivity. Some leaky gut, on testing had low, normal magnesium. It was technically normal, but it was on the low side of normal. So These are all the different things that you can fix. And then on stress testing had high levels of cortisol. Interesting. It was very, very interesting. And then the other thing that I found on the patient, I'm not really sure because I'm actually still working on that, because I was going to deal with that later, is high levels of mercury, very high levels of inorganic mercury in this particular patient. And then the other thing which is also really interesting is I did genetic testing. I like to do genetic testing because it can really sort of, it's like lifting the hood on your car. It can sort of tell you what's going on below the scenes. And the thing about genetics of migraine is there's not, not really one migraine gene. And we can test for these SNPs and variations, but this particular patient had a variation in the genetics, the polymorphisms of a G coupled protein, which has to do with serotonin and stress resiliency. So this person's genetic makeup was such that he was more prone towards the effects of stress. It was a particular gene called HTR1A, which is on the testing that we do with DNA mind test. And I found that really sort of interesting. Otherwise the patient had good genes, they had like good detox genes, good comt genes, et cetera, but had problems with stress. And the patient's history was consistent with that. Stress was one of the big triggers for that particular patient. So stress management is huge for everything that we see in patients who walk through the door. I mean, everybody is affected by stress. You watch the news and you get stressed. Right. That's why I don't have a television. Exactly. And, and so anything that we can do to help people to manage and modulate and detoxify the stress goes a long, long way. Huge. Huge, huge.
Dr. Mark Hyman
What if brain fog, anxiety and mood swings aren't simply all in your head? What if the health of your mind actually starts deeper in your body, in your gut and your hormones, metabolism and your immune system? Well, let me tell you, the connection is real and it affects how you think and you feel every single day. And that's why I created Brain Shap Academy, a six week program that shows you how healing your body can help you heal your mind. Brain Shaping Academy relies on the same targeted nutrition and lifestyle strategies that I've used for 30 years to help my patients improve their mental, emotional and cognitive health. So if you want to feel calmer, clearer and more in control and stay sharp and protect your brain as you age, check out Brain shaping academy. @drhyman.com brainshaping that's Dr. Hyman.com brainshaping thanks for joining me for office hours. I love diving into these topics with you. Remember, you are the CEO of your own health and every choice you make can move you closer to healing and vitality. I want to keep these episodes as relevant and useful as possible. So tell me, what do you want to explore next? What questions are you wrestling with? What breakthroughs are you chasing? Share your ideas in the comments on social media or through the link in the show notes. I'm listening. Until next time. Keep taking charge, keep asking questions and keep showing up for your health.
Podcast Host/Interviewer
If you love this podcast, please share it with someone else you think would also enjoy it. You can find me on all social media channels at rmark Hyman Please reach out. I'd love to hear your comments and questions. Don't forget to rate, review and subscribe to the Dr. Hyman show wherever you get your podcasts. And don't forget to check out my YouTube channel at Dr. Mark Hyman for video versions of this podcast and more. Thank you so much again for tuning in. We'll see you next time on the Dr. Hyman Show. This podcast is separate from my clinical practice at the Ultra Wellness center, my work at Cleveland Clinic and Function Health where I am Chief Medical Officer. This podcast represents my opinions and my guests opinions. Neither myself nor the podcast endorses the views or statements of my guests. This podcast is for educational purposes only and is not a substitute for professional care by a doctor or other qualified medical professional. This podcast is provided with the understanding of that it does not constitute medical or other professional advice or services.
Dr. Mark Hyman
If you're looking for help in your
Podcast Host/Interviewer
journey, please seek out a qualified medical practitioner. And if you're looking for a functional medicine practitioner, visit my clinic, the Ultra Wellness center at ultrawellnesscenter.com and request to become a patient. It's important to have someone in your corner who is a trained, licensed healthcare practitioner and can help you make changes, especially when it comes to your health. This podcast is free as part of my mission to bring practice practical ways of improving health to the public. So I'd like to express gratitude to sponsors that made today's podcast possible. Thanks so much again for listening.
Host: Dr. Mark Hyman
Release Date: May 4, 2026
In this insightful solo episode, Dr. Mark Hyman breaks down the six root causes of migraines and presents a functional medicine roadmap for identifying and addressing them. Migraines, according to Dr. Hyman, are not simply “bad headaches,” but complex neurological events with triggers and root causes throughout the body. By exploring inflammation, blood sugar, hormones, gut health, nutritional deficiencies, and nervous system dysregulation, Dr. Hyman provides listeners with practical strategies to prevent and radically reduce migraine frequency—moving beyond medication to true root-cause healing.
[15:37] - [23:39]
Dr. Hyman’s tone is empathetic, empowering, and practical:
This episode redefines migraines as a deeply interconnected, whole-body issue—driven by inflammations, sugar dips, hormonal swings, nutrient problems, gut imbalances, and chronic stress. Dr. Hyman guides listeners to look beyond medications, offering step-by-step frameworks for identifying triggers and restoring balance. By sharing both science and real patient stories, the episode demystifies migraines and re-centers patient agency in healing.