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Hello and welcome to Zoe Recap, where each week we find the best bits from one of our podcast episodes to help you improve your health. Today we're zooming in on our gut. It's our favorite topic here at Zoe, and for good reason. Research into the gut microbiome continues to reveal just how astonishingly far reaching its effects are. From immune function to metabolic health and even mental well being. Your gut is quite literally at the center of everything. I'm joined by microbiome experts Professor Nicholas Agarta and Tim Spector to recap how we can nurture and take care of it in our daily lives.
B
Let's start at the very beginning. And you know, Tim, why should we care about the microbes in our gut at all?
C
Well, although it's not a question of life or death, they are pretty much crucial for so many processes in our body. And I think what we're realizing is just how crucial they are for our immune system because we've assumed that, okay, microbes are there to digest our food, which is true. They have thousands of chemicals that our body doesn't have itself in order to break down food and extract the nutrients. We know that from mouse experiments. If they take away the microbes, make them sterile, those Microsoft mice have to eat like 30, 40% more every day just to stay alive because they don't have those careful processes. So life would be a struggle. But I think the new science is telling us that the immune system is the key to why we need a gut microbiome to be healthy. Because 70% of our immune system is in the lining of our guts, and that's interacting with, with our microbes. So our microbes are essentially mini pharmacies, pumping out chemicals that are interacting with all those cells, those immune cells, and that's priming them so they know whether to attack things or to defend things or just to get it right. And when it goes wrong, that's when you get food allergies, that's when you get autoimmune diseases, that's when you don't detect early cancers, and that's when you don't repair some of the processes of aging. So increasingly, we're expanding our view of what the microbiome does from a rather limited idea of, oh, it helps break down food and it's quite useful for our energy balance and our metabolism to a much broader idea of what they all really do, which is we're starting to see in some areas like cancer and immunotherapy, et cetera, et cetera. So I think that's what why everyone needs to know about the gut microbiome and everyone really needs to know that it's not just about how we break down food, it's absolutely crucial. And that explains a lot of the western epidemics of chronic disease that as we've lost our gut microbes over the last 50 years, we've also gained all these diseases, all these allergies, all these immune problems and we're facing this pandemic of ill health. So by understanding the gut microbes we can get back on track and really start to get back to our original where our set point of health. And to do that we need a healthy set of gut microbes.
D
And I will actually also add the brain, because there is the gut brain axis. Microbes are connected with our brain through chemicals, through neurotransmitters that are produced. So there is a connection between our gut and our brain brain. So even more functions, yes, they actually.
C
Produce the neurochemicals to make these key differences between us being happy and sad, depressed or anxious. And we're only just discovering all those intricacies there. So yes, they're key to virtually all the bits of our body and we ignore them at our peril.
B
I always love hearing Tim and Nicola talk about this because you come away just thinking how amazing it is and how important it is and of course how know new it is as well. And I think we can explore a bit today sort of the things that people are coming, starting to understand. Before we do that, just can you help us to understand like how many different bacteria and other microbes are there in our gut?
C
Well, Nicola might have a different number to me because everyone you ask can't really give you an exact figure for this, but in total numbers there are hundreds of trillions of bacteria. But there are also another related species called archaea, which we don't talk about much because we don't know as much about them. Then we've got five times as many viruses, little mini viruses called phages, which eat the bacteria. And within all that lot we've got fungi, we've got yeasts and we've even got parasites which we're starting to find are of great interest. And some of them are even healthy. So we've got this menagerie, if you like. It's like a jungle out there of lots of predators eating each other, controlling each other, struggling for survival. Little ones, big ones, fat eating ones, protein eating ones, sugar eating ones, fiber eating ones, and they're all in these ecosystems struggling for Survival. And as they eat the food, they're pumping out all these incredible chemicals that are used by our body, our immune cells and our health. So you've got to try and envisage this as this living community of microbes working together and totally dependent on the food that we give them. And I think that's really important, which sets their environment. And if we get that wrong, that environment shifts and those populations shift. Just like if there's no rainfall in a forest or you spray pesticide all over it, you're gonna get a very different environment. Everything from the tiny insects to the lions and the big beasts, they're all inside our gut and everyone has a very different community.
B
Could we talk about what's the actionable advice you would give to somebody listening to this saying, I'd really love to improve my good bugs, I'd really love to shrink my bad bugs. You know, what's the key advice that you would give both of you?
C
Well, I've got five simple rules really to improve your gut health. First, try and eat a diverse range of whole plants. And we think at the moment the optimum is around 30 plants. We're doing some other studies to see if that's still true now with these new tests. But 30 different plants a week is what people should aim for. Not problem if you don't always make it, but aim to get it right up. Currently people have about five on average. Right. So there's a long way to go. Second is eat the rainbow. Try and eat colorful plants because of the polyphenols, these defense chemicals in them, which our microbes eat and is a source of energy, which we didn't know that before. And that is includes all kinds of bitter foods as well. Extra virgin olive oil, for example, nuts, seeds, dark chocolate, then fermented foods. Having regular small amounts regularly of fermented foods has been shown to improve your gut microbes and improve your immune function. So dampens down those inflammatory microbes. And fourthly, give your gut a break. We've talked about time restricted eating. If you can eat within a 10 hour window, or if you can't do that, a 12 hour window. @ least you give your microbes a rest overnight. That helps them, that make them more efficient. And finally, don't poison them with too many chemicals from ultra processed foods, because ultra processed foods have a negative impact on your gut microbe in ways we're still understanding, but things like sweeteners, emulsifiers, preservatives, et cetera, et cetera. So they're my five rules. And of course there are other ways, you know, the environment, aren't there?
D
Of course, yeah, these are the great general rules now. But I think in addition, the challenge is to understand what it personalizes to you. And that is what we are trying to get from the data. Because maybe for you the best is 30. For some 30 different vegetables, for others, maybe 20 or 40. So that is the personalized part of it that can add a big added value to that.
B
And can I wrap up with a couple? We had a lot of questions from the community. I think we've managed to answer some of them. I want to pick a couple that we haven't hit here that were specific since I've got both of you, which is rather special to have you physically in the room here. So one question was, how rapidly can I damage my microbiome? And we had a lot of questions saying, I've gone on holiday, I've eaten really terrible food for a week. Lots of all the things that Tim tells me I shouldn't have done. Have I wrecked my microbiome? Will my bad microbes have doubled during this period in a week? How worried should people be?
D
Well, I think you should be very worried. If you go on holiday and then you get sick and you have to take antibiotics, for example, that will ruin the most of it. Otherwise, I think, you know, we all go on holidays and we need to eat differently. So it's not a huge problem if it is for. For a week or so, because there is these dynamics of the microbiome, you can then go back. And I think in general, if you travel or go on holidays and you have a diversity of food wherever you are, it's also going to improve. So I think there is this memory of the microbiome that unless you continue with antibiotics or very bad food for a long time is unlikely you will disrupt it completely.
C
The caveat might be if you go on a junk food holiday and you only eat junk food for say like 10 days and you have zero fiber, no diversity, having the same meal. And this is the experiment I put my son through a few years back when he was a student. So for 10 days he had only chicken nuggets or a Big Mac and Coca Cola, and he lost 30 or 40% of his diversity in that time and I'm afraid to say still hasn't regained it. So I think. So the caveat is don't go on a purely junk food, zero fiber holiday because your microbes may take much longer to recover.
B
And my takeaway from this is and it's one of the things I think that you and Sarah and other people talk a lot about at Zoe is like, it's fine to have treats, it's fine to add some stuff on top. So in the sense in the holiday, like, buy, by all means, have your pizza and your ice cream, but you'd like to make sure you're still having some food through this, that's going to sort of support your microbiome because it sort of makes sense, right, if you starve them for 10 days and they all, they like reproduce very fast. Right, Nicholas? Like once an hour or, or something like this. Right. You can see that's a lot of generations with no food, which I guess I, I sort of think of as well, that's quite different, right, than saying, okay, I'm going to give a lot of stuff that's maybe good for my bad microbes, but I am still providing some food for the good and we'll get them back after the holiday. Is that a sort of practical way to. That's like, been my practical approach to holiday now.
C
Yeah. Give them a minimum diet, but in a way the people should be relaxed. If you've got a healthy gut microbiome, you can afford more leeway than someone who's got a really sick microbiome. And I think that's the key. If you've built up your gut microbes, well, you can have the odd excursion with junk food and you'll bounce back, but if you've got a really poor one and you go overboard, then you're really in trouble.
B
But yes, and I think the funny thing is that I also found my tastes have changed a lot. I still definitely want gelato. That comes up quite often on these podcasts, but there's a lot of junk food that I used to eat that actually now sort of seems quite disgusting, having switched away from it for a plant period. And you realize you sort of got addicted to this stuff. And I know we'll talk about that on another podcast. Final question, because this came up interesting, was like the top question. Is there any data about whether taking painkillers regularly can negatively impact the gut microbiome?
D
Well, we know, as Tim mentioned, that probably the two main worst medication are proton pipe inhibitors and antibiotics, but all the others are not positive for the microbiome for sure. So I don't think we have a lot of data from Zoe on painkillers, but also from other studies, we see they are not good for sure, not at the level of antibiotics and protoplantin. Inhibitors, but definitely something to keep an.
C
Eye on for painkillers. We know that, you know, they've studied paracetamol quite well, and we know that the reason they don't work in some people is just because they don't have the right microbes. So it's quite possible that some of these side effects people might get might also be related to the gut microbes. We simply don't know enough. But we do know that at least 50% of all the drugs people take are interacting with your gut microbes in some way. And we have to be a bit cautious that all of them could be doing damage or interacting in some way. So it's an area we need to do much more research on.
D
But the example I did was just because there are very few examples that are documented. So with the variety of drugs that we can take and the divest of our microbiome, it's another line of research that should keep us busy.
B
So I think, Nicola, you feel like your career is set for the rest of your years. I feel with this, we still have.
D
A bit of work to do.
C
Yes, yeah, absolutely. And, you know, we did some work on cancer therapies and immunotherapy. And certainly the state of your gut microbes is probably the number one factor that determines whether you're gonna respond to immunotherapy and cancer. And so increasingly, I think this, you know, when people are put on drugs, physicians are going to have to learn more about the gut microbiome and take that into account. And as we start to balance, balance these things up, because it really, in some cases is a matter of life and death.
D
Yeah.
A
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Podcast: ZOE Science & Nutrition
Host: Jonathan Wolf
Guests: Professor Nicola Segata & Tim Spector
Release Date: June 10, 2025
In the latest episode of ZOE Science & Nutrition, host Jonathan Wolf delves into the intricate world of gut health, a cornerstone topic for the ZOE community. Joined by esteemed microbiome experts Professor Nicola Segata and Tim Spector, the discussion highlights the profound impact of the gut microbiome on overall health, encompassing immune function, metabolic processes, and mental well-being.
At the heart of the discussion, Tim Spector underscores the vital functions of gut microbes beyond mere digestion. He explains, "70% of our immune system is in the lining of our guts, and that's interacting with our microbes." (00:48). This interaction is pivotal in regulating immune responses, determining whether the body should attack pathogens or defend against them. Disruptions in this balance can lead to food allergies, autoimmune diseases, impaired cancer detection, and hindered aging processes.
Nicola Segata expands on the gut's influence on mental health, introducing the concept of the gut-brain axis. She states, "Microbes are connected with our brain through chemicals, through neurotransmitters that are produced." (03:24). This connection elucidates how gut health can directly affect mood states, potentially influencing conditions like depression and anxiety.
Professor Segata provides an overview of the complex ecosystem within our gut. He describes it as a "menagerie... a jungle out there of lots of predators eating each other, controlling each other." (04:21). The gut hosts hundreds of trillions of bacteria, archaea, viruses (phages), fungi, yeasts, and even certain parasites. Each microorganism plays a specific role, whether it's digesting proteins, sugars, or fibers, and producing chemicals essential for the host's health. The delicate balance of this ecosystem is heavily influenced by diet and environmental factors, akin to how a forest's biodiversity is affected by rainfall or pesticides.
Tim Spector outlines five actionable rules to enhance gut health:
Eat a Diverse Range of Whole Plants: Aim for around 30 different plant types per week to increase gut microbial diversity. Currently, most people consume only about five.
Eat the Rainbow: Incorporate colorful plants rich in polyphenols—"defense chemicals in them, which our microbes eat and is a source of energy." (06:31) Foods like nuts, seeds, dark chocolate, and bitter foods fall into this category.
Include Fermented Foods: Regular consumption of fermented foods can "improve your gut microbes and improve your immune function." (06:31)
Give Your Gut a Break: Practice time-restricted eating by limiting food intake to a 10-12 hour window daily, allowing the gut microbes to rest and function more efficiently.
Avoid Excessive Chemicals from Ultra-Processed Foods: Reduce intake of sweeteners, emulsifiers, and preservatives that negatively impact gut microbes.
Tim emphasizes the importance of maintaining a balanced environment for these microbes, comparing it to nurturing an ecosystem where the right diet ensures their optimal functionality.
Nicola Segata highlights the significance of personalized approaches in gut health management. She notes, "Maybe for you the best is 30 [different plants]. For some 30 different vegetables, for others, maybe 20 or 40." (08:15). This personalization is based on individual microbiome compositions, suggesting that while general guidelines are beneficial, tailored strategies can offer enhanced results.
Addressing community concerns, the guests discuss the impact of temporary dietary indulgences, such as holiday eating, on the gut microbiome.
Tim Spector reassures listeners that short-term deviations, like a week of poor eating habits, "is not a huge problem if it is for a week or so, because there is these dynamics of the microbiome, you can then go back." (09:17). The microbiome has a degree of resilience, often returning to its baseline state after dietary corrections.
However, Nicola Segata warns against extended periods of "junk food holiday" devoid of fiber and diversity. She shares an anecdote: "For 10 days he had only chicken nuggets or a Big Mac and Coca Cola, and he lost 30 or 40% of his diversity in that time and I'm afraid to say still hasn't regained it." (10:00). Such drastic dietary changes can lead to lasting reductions in microbial diversity, complicating recovery.
The consensus is to enjoy treats in moderation while maintaining a base of gut-supportive foods. Nicola adds, "Give them a minimum diet, but in a way the people should be relaxed." (11:32). A robust and diverse microbiome can better withstand occasional indulgences without significant long-term harm.
A top community question addresses the impact of painkillers on the gut microbiome.
While antibiotics and proton pump inhibitors are known to significantly disrupt the microbiome, Tim Spector clarifies that the effects of painkillers are less clear: "We know they are not good for sure, not at the level of antibiotics and proton pump inhibitors." (12:24). The lack of extensive data from ZOE's research underscores the need for more studies in this area.
Nicola Segata points out that over "50% of all the drugs people take are interacting with your gut microbes in some way." (12:55). This interaction can influence drug efficacy and side effects, suggesting that the microbiome plays a critical role in pharmacology.
Both experts agree that the relationship between medications and the microbiome is a burgeoning field requiring further exploration. Nicola remarks, "the state of your gut microbes is probably the number one factor that determines whether you're gonna respond to immunotherapy and cancer." (13:49), highlighting the microbiome's potential influence on treatment outcomes.
As the episode wraps up, the guests reflect on the vastness of the field. Nicola Segata emphasizes the critical nature of ongoing research, especially concerning cancer therapies and immunotherapy. She asserts, "when people are put on drugs, physicians are going to have to learn more about the gut microbiome and take that into account." (13:49).
Tim Spector concurs, noting the endless possibilities for discovery: "But the example I did was just because there are very few examples that are documented." (13:29). The dynamic interaction between the microbiome and various aspects of health ensures that microbiome research remains a pivotal area for future studies.
The episode concludes with a shared enthusiasm for the advancements in gut health science and a commitment to further unraveling the complexities of the microbiome. Listeners are left with a reinforced understanding of the gut's paramount importance and practical steps to nurture their microbial partners for optimal health.
Note: The final segment promoting the ZOE app was intentionally excluded in accordance with the summary guidelines to skip advertisements and non-content sections.